[OPEN-ENG] Microbiome Analysis Guide Book
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  • Microbiome analysis user guide book
  • I. INTRODUCTION
    • 1. Prologue
    • 2. Report & Raw data Download
    • 3. Analysis Report Template
  • II. PROJECT INFORMATION
    • 1. Project Information
  • III. NGS SEQUENCING
    • 1. NGS Statistics
  • IV. TAXONOMY ANALYSIS
    • 1. Taxonomy Summary
    • 2. Krona Chart
  • V. DIVERSITY ANALYSIS
    • 1. α-Diversity
      • Additional Information
    • 2. β-Diversity
    • 3. LEfSe
    • 4. Heatmap
  • Ⅵ. FUNCTIONAL ANALYSIS
    • 1. Functional Profile
      • KEGG page
  • Ⅶ. ADDITIONAL ANALYSIS
    • 1. Phylogenetic tree with Statistics
  • + REFERENCE
    • 1. Reference
    • 2. Database Version
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  • Analysis Report & Raw data Download
  • Download and check analysis results report file using web page
  • Download and check analysis result report file using FTP
  1. I. INTRODUCTION

2. Report & Raw data Download

Previous1. PrologueNext3. Analysis Report Template

Analysis Report & Raw data Download

Download and check analysis results report file using web page

Once the microbiome analysis you requested is completed, we will provide you with a link to download the analysis report and raw data through a separate email.

After receiving the email, the analysis report and data will be stored for one month. After that, you will not be able to access it through the account information you received, so please be sure to download the analysis report and data within one month.

  • ID : Username of 3BIGS Workspace

  • PW : Password of 3BIGS Workspace

  • COMMENT : Opinions and comments from analysts

  • Project number : Microbiome analysis project number

  • Region : 16S rRNA hypervariable regions

  • Affiliation : Affiliated organization of the customer requesting the analysis service

  • Name : Name of customer requesting analysis service

  • Sample type : Type of analysis sample

  • Source : Source of analysis sample

  • Quantity of analysis : Number of samples to be analyzed

  • Number of groups : Number of groups to be analyzed

Clicking Download Files in Email will open the 3BIGS Workspace Login browser window. Log in by entering the ID and PW provided in the email as Username and Password on the page.

Access address : https://file.3bigs.com/workspace/#

When you log in, there are two compressed files as follows.

  • Project Name_REPORT.zip : Microbiome analysis report file

  • rawdata.zip : Raw data file

  1. When you unzip the microbiome analysis report file, you can see 2 folders and 1 html file. Among these, you can check the report through the 'Project Name_REPORT.html' file.

  1. When you unzip the microbiome analysis report file, you can see 2 folders and 1 html file. Among these, you can check the report through the 'Project Name_REPORT.html' file.


A summary of how to download the 3BIGS Workspace microbiome analysis report is provided below.


Download and check analysis result report file using FTP

You can download analysis reports and raw data via FTP.

It supports downloading large amounts of data by accessing a separate FTP program using the ID and PW received via email.

  • HOST : file.3bigs.com

  • ID : {Account received}

  • PW : {Password received}

FTP application, Filezilla ()

https://filezilla-project.org/
Analysis report email template
Microbiome analysis results report - Workspace Login
Microbiome analysis results report - Workspace Login
Microbiome analysis results report - File Download
Project Name_REPORT.zip
rawdata.zip
File Download Summary
FTP access page via FTP program Filezilla