[OPEN-ENG] Microbiome Analysis Guide Book
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  • Microbiome analysis user guide book
  • I. INTRODUCTION
    • 1. Prologue
    • 2. Report & Raw data Download
    • 3. Analysis Report Template
  • II. PROJECT INFORMATION
    • 1. Project Information
  • III. NGS SEQUENCING
    • 1. NGS Statistics
  • IV. TAXONOMY ANALYSIS
    • 1. Taxonomy Summary
    • 2. Krona Chart
  • V. DIVERSITY ANALYSIS
    • 1. α-Diversity
      • Additional Information
    • 2. β-Diversity
    • 3. LEfSe
    • 4. Heatmap
  • Ⅵ. FUNCTIONAL ANALYSIS
    • 1. Functional Profile
      • KEGG page
  • Ⅶ. ADDITIONAL ANALYSIS
    • 1. Phylogenetic tree with Statistics
  • + REFERENCE
    • 1. Reference
    • 2. Database Version
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  1. V. DIVERSITY ANALYSIS

2. β-Diversity

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Last updated 1 year ago

Beta-Diversity page

The average species diversity of an ecosystem is called alpha diversity, and the species diversity between habitats is called beta diversity. This is a method of checking how much species composition changes according to the various environmental slopes and whether there are differences in their diversity, and the association between species can be revealed by calculating the distance measure between each sample and group. The beta diversity algorithm mainly utilizes Bray-Curtis.

Information limitation

This guidebook is for general researchers who have not applied for the services of 3BIGS. Detailed explanations and contents in the analysis results report are limited, and a guidebook with detailed explanations for each page and full contents is provided to researchers who have been provided with the analysis results.

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Beta-Diversity page